C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531500 RBM25-010 ENSG00000119707 9606 + 14:73058533-73097100 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0001 VISTA 14:72878760-73482269
CIL_0001TO CIL_0001TO_0001 CGP 14:72969451-73123898
CIL_0003OW CIL_0003OW_0001 CGP 14:73058436-73223691

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048155 Rbm25-002 protein_coding Mus_musculus 0 985
ENSMUST00000181983 Rbm25-003 protein_coding Mus_musculus 0 983
ENSMUST00000182255 Rbm25-004 retained_intron Mus_musculus 0 887
ENSMUST00000182036 Rbm25-009 protein_coding Mus_musculus 0 789
ENSMUST00000183128 Rbm25-013 retained_intron Mus_musculus 0 664
ENSMUST00000182618 Rbm25-012 protein_coding Mus_musculus 0 632
ENSMUST00000182633 Rbm25-010 nonsense_mediated_decay Mus_musculus 0 457
ENSMUST00000183039 Rbm25-021 processed_transcript Mus_musculus 0 444
ENSMUST00000182450 Rbm25-020 nonsense_mediated_decay Mus_musculus 0 444
ENSMUST00000183154 Rbm25-008 protein_coding Mus_musculus 0 364
ENSMUST00000182004 Rbm25-007 protein_coding Mus_musculus 0 364
ENSMUST00000182032 Rbm25-005 retained_intron Mus_musculus 0 207
ENSMUST00000182347 Rbm25-011 protein_coding Mus_musculus 2e-19 100

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