C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182255 Rbm25-004 ENSMUSG00000010608 10090 + 12:83642699-83668483 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000182255
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000182255 4.374±0.00 5.582±0.00 7.594±0.00 2.470±0.20 2.326±0.61 1.692±0.13 4.052±1.74 1.781±0.37 5.513±2.77 9.512±2.32 3.498±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0002 VISTA 12:83418739-84022790
CIL_0001TO CIL_0001TO_0002 CGP 12:83546941-83683123
CIL_0003OW CIL_0003OW_0002 CGP 12:83631236-83735199

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261973 RBM25-001 protein_coding Homo_sapiens 0 1086
ENST00000525321 RBM25-005 protein_coding Homo_sapiens 0 2217
ENST00000526754 RBM25-006 protein_coding Homo_sapiens 0 1086
ENST00000527432 RBM25-007 protein_coding Homo_sapiens 0 1086
ENST00000528081 RBM25-008 nonsense_mediated_decay Homo_sapiens 0 789
ENST00000531500 RBM25-010 protein_coding Homo_sapiens 0 887
ENST00000532192 RBM25-012 protein_coding Homo_sapiens 0 590
ENST00000532683 RBM25-004 retained_intron Homo_sapiens 0 2449

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