C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphatidylserine synthase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531520 PTDSS2-005 ENSG00000174915 9606 + 11:450296-487470 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartENST00000531520
Transcript ID Colon Heart
ENST00000531520 1.007±0.00 1.256±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UP CIL_0002UP_0001 CGP 11:417933-491399
CIL_0003OS CIL_0003OS_0001 CGP 11:448268-507300

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174373 Ptdss2-006 nonsense_mediated_decay Mus_musculus 0 555
ENSMUST00000174706 Ptdss2-002 retained_intron Mus_musculus 0 553
ENSMUST00000026568 Ptdss2-001 protein_coding Mus_musculus 0 553
ENSMUST00000172787 Ptdss2-003 protein_coding Mus_musculus 0 551
ENSMUST00000174612 Ptdss2-005 nonsense_mediated_decay Mus_musculus 0 307
ENSMUST00000173572 Ptdss2-007 processed_transcript Mus_musculus 0 268
ENSMUST00000173721 Ptdss2-008 processed_transcript Mus_musculus 0 267
ENSMUST00000174058 Ptdss2-004 nonsense_mediated_decay Mus_musculus 0 207

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