C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533309 TRIM3-004 ENSG00000110171 9606 - 11:6448614-6451969 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000533309
Transcript ID Placenta
ENST00000533309 0.757±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A5 CIL_0004A5_0001 CGP 11:6431049-6474459
CIL_0004A8 CIL_0004A8_0001 CGP 11:6448613-6481479

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106789 Trim3-001 protein_coding Mus_musculus 0 1506
ENSMUST00000057525 Trim3-003 protein_coding Mus_musculus 0 1506
ENSMUST00000106791 Trim3-002 protein_coding Mus_musculus 0 813
ENSMUST00000154218 Trim3-008 retained_intron Mus_musculus 0 595

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