C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif-containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154218 Trim3-008 ENSMUSG00000036989 10090 - 7:105612308-105613406 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000154218
Transcript ID Brain Ovary Placenta
ENSMUST00000154218 29.289±0.00 6.301±0.00 5.777±3.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A5 CIL_0004A5_0002 CGP 7:105591613-105633571
CIL_0004A8 CIL_0004A8_0002 CGP 7:105604463-105640416

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345851 TRIM3-001 protein_coding Homo_sapiens 0 595
ENST00000359518 TRIM3-201 protein_coding Homo_sapiens 0 595
ENST00000525074 TRIM3-002 protein_coding Homo_sapiens 0 595
ENST00000530724 TRIM3-012 processed_transcript Homo_sapiens 0 488
ENST00000532542 TRIM3-003 retained_intron Homo_sapiens 0 479
ENST00000533309 TRIM3-004 retained_intron Homo_sapiens 0 595
ENST00000536344 TRIM3-202 protein_coding Homo_sapiens 0 595

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