C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET binding factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533770 SBF2-002 ENSG00000133812 9606 - 11:9838039-10193957 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyOvaryENST00000533770
Transcript ID Bladder Breast Heart Kidney Ovary
ENST00000533770 4.265±0.00 3.127±0.00 0.959±0.00 1.068±0.00 3.205±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CP CIL_0009CP_0001 VISTA 11:9311967-9915183
CIL_0004J8 CIL_0004J8_0001 CGP 11:9664077-10294207
CIL_0004J7 CIL_0004J7_0001 CGP 11:9778667-10307397

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033058 Sbf2-201 protein_coding Mus_musculus 0 4292
ENSMUST00000164759 Sbf2-001 protein_coding Mus_musculus 0 4292
ENSMUST00000166020 Sbf2-002 protein_coding Mus_musculus 0 4041
ENSMUST00000165449 Sbf2-003 retained_intron Mus_musculus 0 2638
ENSMUST00000171378 Sbf2-004 retained_intron Mus_musculus 0 2571
ENSMUST00000167880 Sbf2-006 retained_intron Mus_musculus 0 1953
ENSMUST00000171218 Sbf2-007 protein_coding Mus_musculus 0 1328
ENSMUST00000164559 Sbf2-011 protein_coding Mus_musculus 0 575
ENSMUST00000167652 Sbf2-008 nonsense_mediated_decay Mus_musculus 0 466
ENSMUST00000166885 Sbf2-010 protein_coding Mus_musculus 0 204

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