C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET binding factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167880 Sbf2-006 ENSMUSG00000038371 10090 - 7:110425626-110614882 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CP CIL_0009CP_0002 VISTA 7:109862809-110466321
CIL_0004J8 CIL_0004J8_0002 CGP 7:110221703-110614922
CIL_0004J7 CIL_0004J7_0002 CGP 7:110308013-110629820

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256190 SBF2-001 protein_coding Homo_sapiens 0 2220
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 364
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 364
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 331
ENST00000420722 SBF2-008 protein_coding Homo_sapiens 0 444
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 219
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0.00000000000005 82
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 364
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 296
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 2e-21 108
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 1e-17 95
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 333
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 313
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 3e-33 148
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 270
ENST00000527019 SBF2-007 processed_transcript Homo_sapiens 0 881
ENST00000533661 SBF2-003 retained_intron Homo_sapiens 0 608
ENST00000533770 SBF2-002 retained_intron Homo_sapiens 0 1953
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 292
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 202
ENST00000617179 SBF2-201 protein_coding Homo_sapiens 0 1882

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