C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rh family, B glycoprotein (gene/pseudogene)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537040 RHBG-001 ENSG00000132677 9606 + 1:156369212-156385219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryTestisENST00000537040
Transcript ID Kidney Ovary Testis
ENST00000537040 2.275±1.99 2.830±0.00 0.213±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0008519 ISS:IEA ammonium transmembrane transporter activity
GO:0014731 IMP spectrin-associated cytoskeleton
GO:0015696 ISS:IEA ammonium transport
GO:0016020 IEA membrane
GO:0016323 ISS basolateral plasma membrane
GO:0030506 IPI ankyrin binding
GO:0031410 IEA cytoplasmic vesicle
GO:0046658 IMP anchored component of plasma membrane
GO:0055085 TAS transmembrane transport
GO:0070634 IDA transepithelial ammonium transport
GO:0072488 IEA ammonium transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171887 Rhbg-001 protein_coding Mus_musculus 0 1437
ENSMUST00000165196 Rhbg-002 protein_coding Mus_musculus 0 1256
ENSMUST00000163277 Rhbg-003 processed_transcript Mus_musculus 0 913

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