| Transcript ID | Breast | Kidney | Liver |
|---|---|---|---|
| ENST00000539737 | 0.862±0.00 | 0.468±0.00 | 0.920±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | U6 snRNA biogenesis 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000539737  |
USB1-002 |
ENSG00000103005 |
9606 | + |
16:58001405-58020634  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008Z0 | CIL_0008Z0_0001 | VISTA | 16:57818949-58421282 |
| CIL_00052C | CIL_00052C_0002 | CGP | 16:57994668-58021618 |
| CIL_0004RY | CIL_0004RY_0001 | CGP | 16:57999546-58046901 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000175 | IDA | 3'-5'-exoribonuclease activity |
| GO:0004518 | IEA | nuclease activity |
| GO:0005634 | IDA | nucleus |
| GO:0006397 | IEA | mRNA processing |
| GO:0008380 | IMP | RNA splicing |
| GO:0034477 | IMP:IEA | U6 snRNA 3'-end processing |
| GO:0090503 | IDA | RNA phosphodiester bond hydrolysis, exonucleolytic |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000034245
|
Usb1-001 | protein_coding | Mus_musculus | 0 | 355 |
|
ENSMUST00000145060
|
Usb1-003 | retained_intron | Mus_musculus | 0 | 337 |
