C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062401-ENSDARG00000003841 CGP 7955 25:14104658-14118870
GeneTranscriptPositionBiotype
ENSDARG00000003841 (usb1)
U6 snRNA biogenesis 1 		ENSDART00000007029 (usb1-201) 14109371-14118870 protein_coding
ENSDARG00000062401 (znf319)
zinc finger protein 319 		ENSDART00000090226 (znf319-201) 14104658-14106514 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00052C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166188-ENSG00000103005 CGP 9606 16:57994668-58021618
GeneTranscriptPositionBiotype
ENSG00000103005 (USB1)
U6 snRNA biogenesis 1 		ENST00000219281 (USB1-001) 58001373-58021618 protein_coding
ENST00000423271 (USB1-004) 58001407-58011708 protein_coding
ENST00000539737 (USB1-002) 58001405-58020634 protein_coding
ENST00000561568 (USB1-014) 58001407-58017417 protein_coding
ENST00000561743 (USB1-012) 57999546-58020542 protein_coding
ENST00000562534 (USB1-018) 58001416-58017440 processed_transcript
ENST00000563149 (USB1-003) 58001420-58013558 protein_coding
ENST00000563207 (USB1-013) 58001424-58017418 processed_transcript
ENST00000564387 (USB1-015) 58001421-58017380 nonsense_mediated_decay
ENST00000565151 (USB1-011) 58013629-58019053 retained_intron
ENST00000565662 (USB1-017) 58001407-58019036 processed_transcript
ENST00000566082 (USB1-005) 58015113-58021617 retained_intron
ENST00000566292 (USB1-010) 58001416-58010170 retained_intron
ENST00000568848 (USB1-009) 58001419-58011475 processed_transcript
ENST00000569252 (USB1-016) 58001416-58014310 processed_transcript
ENST00000624720 (USB1-006) 58010663-58013557 TEC
ENSG00000166188 (ZNF319)
zinc finger protein 319 		ENST00000299237 (ZNF319-001) 57994668-57999858 protein_coding
ENST00000562909 (ZNF319-002) 57998059-58000453 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00052C_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046556-ENSMUSG00000031792 CGP 10090 8:95326137-95347507
GeneTranscriptPositionBiotype
ENSMUSG00000031792 (Usb1)
U6 snRNA biogenesis 1 		ENSMUST00000034245 (Usb1-001) 95332292-95347507 protein_coding
ENSMUST00000126180 (Usb1-002) 95332596-95343165 protein_coding
ENSMUST00000145060 (Usb1-003) 95332325-95344281 retained_intron
ENSMUST00000151223 (Usb1-004) 95345154-95346834 retained_intron
ENSMUSG00000046556 (Zfp319)
zinc finger protein 319 		ENSMUST00000057717 (Zfp319-201) 95326137-95331950 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052C_0001ENSDARG00000003841ENSDART00000007029ENSDARG00000062401ENSDART00000090226CIL_00052C_0002ENSG00000103005ENST00000219281ENST00000423271ENST00000539737ENST00000561568ENST00000561743ENST00000562534ENST00000563149ENST00000563207ENST00000564387ENST00000565151ENST00000565662ENST00000566082ENST00000566292ENST00000568848ENST00000569252ENST00000624720ENSG00000166188ENST00000299237ENST00000562909CIL_00052C_0003ENSMUSG00000031792ENSMUST00000034245ENSMUST00000126180ENSMUST00000145060ENSMUST00000151223ENSMUSG00000046556ENSMUST00000057717
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052C_0001ENSDARG00000003841ENSDART00000007029ENSDARG00000062401ENSDART00000090226CIL_00052C_0002ENSG00000103005ENST00000219281ENST00000423271ENST00000539737ENST00000561743ENST00000562534ENST00000563207ENST00000566082ENST00000624720ENSG00000166188ENST00000299237ENST00000562909CIL_00052C_0003ENSMUSG00000031792ENSMUST00000034245ENSMUST00000145060ENSMUST00000151223ENSMUSG00000046556ENSMUST00000057717
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003841 ENSDART00000007029 N/A N/A N/A 1.931±0.86 N/A N/A 1.965±0.71 1.839±0.79 0.274±0.00 N/A 0.951±0.00 N/A N/A N/A
ENSDARG00000062401 ENSDART00000090226 N/A N/A N/A 2.647±2.01 N/A N/A 0.926±0.40 N/A 0.126±0.00 N/A 0.717±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103005 ENST00000219281 13.402±0.00 13.475±0.00 N/A 8.652±0.00 13.011±0.00 6.299±5.71 2.894±2.75 10.184±0.00 7.108±0.00 11.637±0.00 4.733±0.00 12.618±4.78 13.285±0.55 12.258±1.23
ENST00000423271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.231±0.00 N/A N/A
ENST00000539737 N/A N/A N/A N/A 0.862±0.00 N/A N/A 0.468±0.00 0.920±0.00 N/A N/A N/A N/A N/A
ENST00000561568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561743 N/A N/A 0.460±0.00 0.982±0.00 N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A N/A
ENST00000562534 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.659±0.00 N/A N/A N/A N/A
ENST00000563149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563207 N/A N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A
ENST00000564387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566082 N/A 2.528±0.00 0.126±0.00 0.821±0.65 N/A 0.191±0.00 0.107±0.00 0.115±0.00 0.158±0.00 0.459±0.00 N/A 2.094±0.00 N/A 4.129±0.00
ENST00000566292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.180±0.00 N/A N/A
ENSG00000166188 ENST00000299237 N/A N/A N/A N/A N/A N/A 1.299±1.17 N/A 0.141±0.00 0.260±0.00 0.537±0.00 1.589±0.85 3.305±0.00 N/A
ENST00000562909 N/A N/A N/A N/A N/A N/A N/A N/A 1.790±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031792 ENSMUST00000034245 12.316±2.66 10.924±0.89 16.430±3.36 14.608±2.94 11.112±3.59 15.951±3.70 8.282±0.42 10.927±0.88 8.010±1.28 14.396±0.57 2.359±0.32 17.206±4.27 18.342±9.48 12.495±5.99
ENSMUST00000126180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145060 N/A N/A N/A N/A N/A 3.855±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.527±0.00 4.412±0.00 N/A 1.535±0.00
ENSMUSG00000046556 ENSMUST00000057717 5.356±1.33 6.927±0.47 5.063±0.08 10.547±4.92 6.191±3.03 7.255±0.35 2.573±0.63 3.544±0.28 1.452±0.32 11.535±1.51 1.295±0.32 8.953±2.66 4.933±1.17 3.303±1.28

Loading