C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062401-ENSDARG00000003841 CGP 7955 25:14104658-14118870
GeneTranscriptPositionBiotype
ENSDARG00000003841 (usb1)
U6 snRNA biogenesis 1 		ENSDART00000007029 (usb1-201) 14109371-14118870 protein_coding
ENSDARG00000062401 (znf319)
zinc finger protein 319 		ENSDART00000090226 (znf319-201) 14104658-14106514 protein_coding
CIL_00052C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166188-ENSG00000103005 CGP 9606 16:57994668-58021618
GeneTranscriptPositionBiotype
ENSG00000103005 (USB1)
U6 snRNA biogenesis 1 		ENST00000219281 (USB1-001) 58001373-58021618 protein_coding
ENST00000423271 (USB1-004) 58001407-58011708 protein_coding
ENST00000539737 (USB1-002) 58001405-58020634 protein_coding
ENST00000561568 (USB1-014) 58001407-58017417 protein_coding
ENST00000561743 (USB1-012) 57999546-58020542 protein_coding
ENST00000562534 (USB1-018) 58001416-58017440 processed_transcript
ENST00000563149 (USB1-003) 58001420-58013558 protein_coding
ENST00000563207 (USB1-013) 58001424-58017418 processed_transcript
ENST00000564387 (USB1-015) 58001421-58017380 nonsense_mediated_decay
ENST00000565151 (USB1-011) 58013629-58019053 retained_intron
ENST00000565662 (USB1-017) 58001407-58019036 processed_transcript
ENST00000566082 (USB1-005) 58015113-58021617 retained_intron
ENST00000566292 (USB1-010) 58001416-58010170 retained_intron
ENST00000568848 (USB1-009) 58001419-58011475 processed_transcript
ENST00000569252 (USB1-016) 58001416-58014310 processed_transcript
ENST00000624720 (USB1-006) 58010663-58013557 TEC
ENSG00000166188 (ZNF319)
zinc finger protein 319 		ENST00000299237 (ZNF319-001) 57994668-57999858 protein_coding
ENST00000562909 (ZNF319-002) 57998059-58000453 protein_coding
CIL_00052C_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046556-ENSMUSG00000031792 CGP 10090 8:95326137-95347507
GeneTranscriptPositionBiotype
ENSMUSG00000031792 (Usb1)
U6 snRNA biogenesis 1 		ENSMUST00000034245 (Usb1-001) 95332292-95347507 protein_coding
ENSMUST00000126180 (Usb1-002) 95332596-95343165 protein_coding
ENSMUST00000145060 (Usb1-003) 95332325-95344281 retained_intron
ENSMUST00000151223 (Usb1-004) 95345154-95346834 retained_intron
ENSMUSG00000046556 (Zfp319)
zinc finger protein 319 		ENSMUST00000057717 (Zfp319-201) 95326137-95331950 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052C_0001ENSDARG00000003841ENSDART00000007029ENSDARG00000062401ENSDART00000090226CIL_00052C_0002ENSG00000103005ENST00000219281ENST00000423271ENST00000539737ENST00000561568ENST00000561743ENST00000562534ENST00000563149ENST00000563207ENST00000564387ENST00000565151ENST00000565662ENST00000566082ENST00000566292ENST00000568848ENST00000569252ENST00000624720ENSG00000166188ENST00000299237ENST00000562909CIL_00052C_0003ENSMUSG00000031792ENSMUST00000034245ENSMUST00000126180ENSMUST00000145060ENSMUST00000151223ENSMUSG00000046556ENSMUST00000057717
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052C_0001ENSDARG00000003841ENSDART00000007029ENSDARG00000062401ENSDART00000090226CIL_00052C_0002ENSG00000103005ENST00000219281ENST00000423271ENST00000539737ENST00000561743ENST00000562534ENST00000563207ENST00000566082ENST00000624720ENSG00000166188ENST00000299237ENST00000562909CIL_00052C_0003ENSMUSG00000031792ENSMUST00000034245ENSMUST00000145060ENSMUST00000151223ENSMUSG00000046556ENSMUST00000057717
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003841 ENSDART00000007029 N/A N/A N/A 1.931±0.86 N/A N/A 1.965±0.71 1.839±0.79 0.274±0.00 N/A 0.951±0.00 N/A N/A N/A
ENSDARG00000062401 ENSDART00000090226 N/A N/A N/A 2.647±2.01 N/A N/A 0.926±0.40 N/A 0.126±0.00 N/A 0.717±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103005 ENST00000219281 13.402±0.00 13.475±0.00 N/A 8.652±0.00 13.011±0.00 6.299±5.71 2.894±2.75 10.184±0.00 7.108±0.00 11.637±0.00 4.733±0.00 12.618±4.78 13.285±0.55 12.258±1.23
ENST00000423271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.231±0.00 N/A N/A
ENST00000539737 N/A N/A N/A N/A 0.862±0.00 N/A N/A 0.468±0.00 0.920±0.00 N/A N/A N/A N/A N/A
ENST00000561568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561743 N/A N/A 0.460±0.00 0.982±0.00 N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A N/A
ENST00000562534 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.659±0.00 N/A N/A N/A N/A
ENST00000563149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563207 N/A N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A
ENST00000564387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566082 N/A 2.528±0.00 0.126±0.00 0.821±0.65 N/A 0.191±0.00 0.107±0.00 0.115±0.00 0.158±0.00 0.459±0.00 N/A 2.094±0.00 N/A 4.129±0.00
ENST00000566292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.180±0.00 N/A N/A
ENSG00000166188 ENST00000299237 N/A N/A N/A N/A N/A N/A 1.299±1.17 N/A 0.141±0.00 0.260±0.00 0.537±0.00 1.589±0.85 3.305±0.00 N/A
ENST00000562909 N/A N/A N/A N/A N/A N/A N/A N/A 1.790±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031792 ENSMUST00000034245 12.316±2.66 10.924±0.89 16.430±3.36 14.608±2.94 11.112±3.59 15.951±3.70 8.282±0.42 10.927±0.88 8.010±1.28 14.396±0.57 2.359±0.32 17.206±4.27 18.342±9.48 12.495±5.99
ENSMUST00000126180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145060 N/A N/A N/A N/A N/A 3.855±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.527±0.00 4.412±0.00 N/A 1.535±0.00
ENSMUSG00000046556 ENSMUST00000057717 5.356±1.33 6.927±0.47 5.063±0.08 10.547±4.92 6.191±3.03 7.255±0.35 2.573±0.63 3.544±0.28 1.452±0.32 11.535±1.51 1.295±0.32 8.953±2.66 4.933±1.17 3.303±1.28

Loading