C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004RY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103005-ENSG00000102996 CGP 9606 16:57999546-58046901
GeneTranscriptPositionBiotype
ENSG00000102996 (MMP15)
matrix metallopeptidase 15 (membrane-inserted) 		ENST00000219271 (MMP15-001) 58025566-58046901 protein_coding
ENST00000570065 (MMP15-002) 58040165-58040867 protein_coding
ENSG00000103005 (USB1)
U6 snRNA biogenesis 1 		ENST00000219281 (USB1-001) 58001373-58021618 protein_coding
ENST00000423271 (USB1-004) 58001407-58011708 protein_coding
ENST00000539737 (USB1-002) 58001405-58020634 protein_coding
ENST00000561568 (USB1-014) 58001407-58017417 protein_coding
ENST00000561743 (USB1-012) 57999546-58020542 protein_coding
ENST00000562534 (USB1-018) 58001416-58017440 processed_transcript
ENST00000563149 (USB1-003) 58001420-58013558 protein_coding
ENST00000563207 (USB1-013) 58001424-58017418 processed_transcript
ENST00000564387 (USB1-015) 58001421-58017380 nonsense_mediated_decay
ENST00000565151 (USB1-011) 58013629-58019053 retained_intron
ENST00000565662 (USB1-017) 58001407-58019036 processed_transcript
ENST00000566082 (USB1-005) 58015113-58021617 retained_intron
ENST00000566292 (USB1-010) 58001416-58010170 retained_intron
ENST00000568848 (USB1-009) 58001419-58011475 processed_transcript
ENST00000569252 (USB1-016) 58001416-58014310 processed_transcript
ENST00000624720 (USB1-006) 58010663-58013557 TEC
ENSG00000166188 (ZNF319)
zinc finger protein 319 		ENST00000299237 (ZNF319-001) 57994668-57999858 protein_coding
ENST00000562909 (ZNF319-002) 57998059-58000453 protein_coding
CIL_0004RY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031792-ENSMUSG00000031790 CGP 10090 8:95332292-95374293
GeneTranscriptPositionBiotype
ENSMUSG00000031790 (Mmp15)
matrix metallopeptidase 15 		ENSMUST00000034243 (Mmp15-001) 95352268-95374293 protein_coding
ENSMUSG00000031792 (Usb1)
U6 snRNA biogenesis 1 		ENSMUST00000034245 (Usb1-001) 95332292-95347507 protein_coding
ENSMUST00000126180 (Usb1-002) 95332596-95343165 protein_coding
ENSMUST00000145060 (Usb1-003) 95332325-95344281 retained_intron
ENSMUST00000151223 (Usb1-004) 95345154-95346834 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RY_0001ENSG00000102996ENST00000219271ENST00000570065ENSG00000103005ENST00000219281ENST00000423271ENST00000539737ENST00000561568ENST00000561743ENST00000562534ENST00000563149ENST00000563207ENST00000564387ENST00000565151ENST00000565662ENST00000566082ENST00000566292ENST00000568848ENST00000569252ENST00000624720ENSG00000166188ENST00000299237ENST00000562909CIL_0004RY_0002ENSMUSG00000031790ENSMUST00000034243ENSMUSG00000031792ENSMUST00000034245ENSMUST00000126180ENSMUST00000145060ENSMUST00000151223
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RY_0001ENSG00000102996ENST00000219271ENSG00000103005ENST00000219281ENST00000423271ENST00000539737ENST00000561743ENST00000562534ENST00000563207ENST00000566082ENST00000624720ENSG00000166188ENST00000299237ENST00000562909CIL_0004RY_0002ENSMUSG00000031790ENSMUST00000034243ENSMUSG00000031792ENSMUST00000034245ENSMUST00000145060ENSMUST00000151223
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102996 ENST00000219271 2.862±0.00 3.340±0.00 0.869±0.00 2.541±1.38 11.786±8.36 6.724±1.50 9.934±6.04 6.827±3.49 12.729±12.02 4.265±2.90 1.433±0.64 6.214±4.29 67.059±20.88 19.009±1.81
ENST00000570065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103005 ENST00000219281 13.402±0.00 13.475±0.00 N/A 8.652±0.00 13.011±0.00 6.299±5.71 2.894±2.75 10.184±0.00 7.108±0.00 11.637±0.00 4.733±0.00 12.618±4.78 13.285±0.55 12.258±1.23
ENST00000423271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.231±0.00 N/A N/A
ENST00000539737 N/A N/A N/A N/A 0.862±0.00 N/A N/A 0.468±0.00 0.920±0.00 N/A N/A N/A N/A N/A
ENST00000561568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561743 N/A N/A 0.460±0.00 0.982±0.00 N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A N/A
ENST00000562534 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.659±0.00 N/A N/A N/A N/A
ENST00000563149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563207 N/A N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A
ENST00000564387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566082 N/A 2.528±0.00 0.126±0.00 0.821±0.65 N/A 0.191±0.00 0.107±0.00 0.115±0.00 0.158±0.00 0.459±0.00 N/A 2.094±0.00 N/A 4.129±0.00
ENST00000566292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.180±0.00 N/A N/A
ENSG00000166188 ENST00000299237 N/A N/A N/A N/A N/A N/A 1.299±1.17 N/A 0.141±0.00 0.260±0.00 0.537±0.00 1.589±0.85 3.305±0.00 N/A
ENST00000562909 N/A N/A N/A N/A N/A N/A N/A N/A 1.790±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031790 ENSMUST00000034243 9.146±1.94 6.152±1.03 10.983±2.40 8.869±2.27 15.610±2.51 42.371±4.99 14.628±2.81 1.662±0.32 3.688±3.18 47.412±4.98 5.088±0.73 10.208±2.22 33.386±16.52 0.124±0.07
ENSMUSG00000031792 ENSMUST00000034245 12.316±2.66 10.924±0.89 16.430±3.36 14.608±2.94 11.112±3.59 15.951±3.70 8.282±0.42 10.927±0.88 8.010±1.28 14.396±0.57 2.359±0.32 17.206±4.27 18.342±9.48 12.495±5.99
ENSMUST00000126180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145060 N/A N/A N/A N/A N/A 3.855±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.527±0.00 4.412±0.00 N/A 1.535±0.00

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