C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PTPRF interacting protein, binding protein 1 (liprin beta 1) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000540114  |
PPFIBP1-002 |
ENSG00000110841 |
9606 | + |
12:27524173-27691784  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00056H | CIL_00056H_0001 | CGP | 12:27466810-27695564 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0007160 | IEA | cell-matrix adhesion |
| GO:0007165 | IEA | signal transduction |
| GO:0048786 | IEA | presynaptic active zone |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000016631
|
Ppfibp1-001 | protein_coding | Mus_musculus | 0 | 1762 |
|
ENSMUST00000123902
|
Ppfibp1-004 | retained_intron | Mus_musculus | 0 | 1677 |
|
ENSMUST00000111623
|
Ppfibp1-002 | protein_coding | Mus_musculus | 0 | 1674 |
|
ENSMUST00000154221
|
Ppfibp1-006 | protein_coding | Mus_musculus | 0 | 691 |
|
ENSMUST00000155415
|
Ppfibp1-009 | protein_coding | Mus_musculus | 0 | 477 |
|
ENSMUST00000126774
|
Ppfibp1-007 | processed_transcript | Mus_musculus | 0 | 331 |
|
ENSMUST00000136837
|
Ppfibp1-010 | protein_coding | Mus_musculus | 0 | 313 |
|
ENSMUST00000149203
|
Ppfibp1-005 | retained_intron | Mus_musculus | 8e-33 | 147 |
