C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ligand dependent nuclear receptor corepressor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540664 LCOR-201 ENSG00000196233 9606 + 10:96832260-96964431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000540664
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000540664 0.549±0.00 0.669±0.00 0.368±0.00 0.675±0.00 0.360±0.00 0.442±0.12 1.859±0.00 0.288±0.00 0.666±0.00 0.303±0.10 1.388±0.00 0.662±0.47 1.391±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GA CIL_0003GA_0001 CGP 10:96593312-96981043
CIL_0008SO CIL_0008SO_0001 VISTA 10:96654859-97255972
CIL_0005ID CIL_0005ID_0001 CGP 10:96832260-96986212

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067795 Lcor-201 protein_coding Mus_musculus 0 2900
ENSMUST00000163929 Lcor-202 protein_coding Mus_musculus 0 2117

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