C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003GA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155629-ENSG00000196233 CGP 9606 10:96593312-96981043
GeneTranscriptPositionBiotype
ENSG00000155629 (PIK3AP1)
phosphoinositide-3-kinase adaptor protein 1 		ENST00000339364 (PIK3AP1-001) 96593312-96720514 protein_coding
ENST00000371109 (PIK3AP1-004) 96595208-96633241 protein_coding
ENST00000371110 (PIK3AP1-002) 96594495-96669611 protein_coding
ENST00000467625 (PIK3AP1-006) 96595565-96618788 processed_transcript
ENST00000468783 (PIK3AP1-003) 96628398-96700878 processed_transcript
ENST00000489982 (PIK3AP1-007) 96603740-96620411 processed_transcript
ENSG00000196233 (LCOR)
ligand dependent nuclear receptor corepressor 		ENST00000356016 (LCOR-010) 96832955-96958891 protein_coding
ENST00000371097 (LCOR-009) 96832980-96958926 protein_coding
ENST00000371103 (LCOR-015) 96832282-96958933 protein_coding
ENST00000463415 (LCOR-012) 96949223-96958515 processed_transcript
ENST00000469510 (LCOR-013) 96907286-96908090 retained_intron
ENST00000493486 (LCOR-011) 96907285-96949126 processed_transcript
ENST00000498444 (LCOR-014) 96949142-96981043 processed_transcript
ENST00000540664 (LCOR-201) 96832260-96964431 protein_coding
ENSG00000202047 (RNA5SP324)
RNA, 5S ribosomal pseudogene 324 		ENST00000365177 (RNA5SP324-201) 96619376-96619483 rRNA
ENSG00000221465 (AL162502.1)
 ENST00000408538 (AL162502.1-201) 96920702-96920791 miRNA
ENSG00000227032 (RP11-34E5.4)
 ENST00000456516 (RP11-34E5.4-001) 96620877-96621707 processed_pseudogene
ENSG00000232875 (HMGN2P35)
high mobility group nucleosomal binding domain 2 pseudogene 35 		ENST00000412164 (HMGN2P35-001) 96915633-96915902 processed_pseudogene
ENSG00000236552 (RPL13AP5)
ribosomal protein L13a pseudogene 5 		ENST00000439189 (RPL13AP5-001) 96750288-96750899 processed_pseudogene
CIL_0003GA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025017-ENSMUSG00000025019 CGP 10090 19:41274218-41562246
GeneTranscriptPositionBiotype
ENSMUSG00000025017 (Pik3ap1)
phosphoinositide-3-kinase adaptor protein 1 		ENSMUST00000059672 (Pik3ap1-201) 41274218-41385070 protein_coding
ENSMUSG00000025019 (Lcor)
ligand dependent nuclear receptor corepressor 		ENSMUST00000067795 (Lcor-201) 41482645-41562246 protein_coding
ENSMUST00000163929 (Lcor-202) 41549639-41559781 protein_coding
ENSMUSG00000044065 (Gm9788)
predicted pseudogene 9788 		ENSMUST00000057038 (Gm9788-201) 41459813-41460718 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GA_0001ENSG00000155629ENST00000339364ENST00000371109ENST00000371110ENST00000467625ENST00000468783ENST00000489982ENSG00000196233ENST00000356016ENST00000371097ENST00000371103ENST00000463415ENST00000469510ENST00000493486ENST00000498444ENST00000540664ENSG00000202047ENST00000365177ENSG00000221465ENST00000408538ENSG00000227032ENST00000456516ENSG00000232875ENST00000412164ENSG00000236552ENST00000439189CIL_0003GA_0002ENSMUSG00000025017ENSMUST00000059672ENSMUSG00000025019ENSMUST00000067795ENSMUST00000163929ENSMUSG00000044065ENSMUST00000057038
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GA_0001ENSG00000155629ENST00000339364ENST00000371110ENST00000468783ENSG00000196233ENST00000356016ENST00000371103ENST00000540664ENSG00000202047ENST00000365177ENSG00000221465ENST00000408538ENSG00000227032ENST00000456516ENSG00000232875ENST00000412164ENSG00000236552ENST00000439189CIL_0003GA_0002ENSMUSG00000025017ENSMUST00000059672ENSMUSG00000025019ENSMUST00000067795ENSMUST00000163929ENSMUSG00000044065ENSMUST00000057038
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155629 ENST00000339364 2.026±0.00 2.993±0.00 N/A 0.336±0.25 0.630±0.00 0.630±0.00 0.241±0.15 4.538±2.21 3.836±3.46 3.125±1.82 0.237±0.00 1.910±1.57 4.417±0.94 N/A
ENST00000371109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371110 N/A N/A 1.738±0.00 0.152±0.00 2.085±0.00 N/A 0.711±0.00 4.778±0.00 1.025±0.00 3.337±0.00 0.173±0.00 2.196±0.00 N/A N/A
ENST00000467625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468783 N/A N/A N/A 0.906±0.00 N/A 0.633±0.00 N/A N/A N/A 2.640±0.00 N/A N/A 3.549±0.00 1.001±0.00
ENST00000489982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196233 ENST00000356016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A N/A
ENST00000371097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371103 N/A N/A 1.904±0.00 N/A 2.407±0.00 2.256±0.00 0.741±0.00 N/A N/A N/A N/A N/A 0.433±0.00 N/A
ENST00000463415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540664 0.549±0.00 0.669±0.00 N/A 0.368±0.00 0.675±0.00 0.360±0.00 0.442±0.12 1.859±0.00 0.288±0.00 0.666±0.00 0.303±0.10 1.388±0.00 0.662±0.47 1.391±0.00
ENSG00000202047 ENST00000365177 N/A N/A N/A N/A N/A N/A 0.532±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000221465 ENST00000408538 N/A 0.541±0.00 N/A 0.166±0.00 N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000227032 ENST00000456516 N/A 0.213±0.00 N/A N/A 1.741±0.00 0.062±0.00 N/A 2.440±0.00 0.086±0.00 0.965±0.85 N/A 0.353±0.24 N/A 0.058±0.00
ENSG00000232875 ENST00000412164 0.059±0.00 0.128±0.00 N/A 0.262±0.00 1.476±0.00 N/A 0.124±0.00 N/A N/A 0.334±0.00 0.060±0.00 0.436±0.00 N/A 0.282±0.00
ENSG00000236552 ENST00000439189 0.678±0.00 0.833±0.00 1.112±0.00 0.315±0.18 0.595±0.28 0.919±0.27 0.274±0.19 0.462±0.19 0.856±0.82 0.706±0.29 0.420±0.18 5.323±8.30 0.366±0.39 0.866±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025017 ENSMUST00000059672 1.924±0.00 1.915±0.42 N/A 0.781±0.00 3.381±0.43 1.072±0.53 0.438±0.00 0.756±0.00 5.130±0.68 5.386±0.74 0.073±0.03 3.099±2.31 1.821±0.77 0.738±0.32
ENSMUSG00000025019 ENSMUST00000067795 0.953±0.39 1.419±0.22 N/A 0.972±0.00 1.986±0.54 2.147±0.25 0.997±0.21 1.415±0.43 1.464±0.39 2.127±0.16 0.284±0.01 1.998±0.42 2.898±0.54 0.419±0.12
ENSMUST00000163929 N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A 0.309±0.00 N/A N/A
ENSMUSG00000044065 ENSMUST00000057038 N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 0.024±0.01 0.055±0.00 N/A 0.197±0.00 0.077±0.03 N/A

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