C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: repulsive guidance molecule family member a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542321 RGMA-007 ENSG00000182175 9606 - 15:93043416-93073148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000542321
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000542321 13.570±0.00 11.380±0.00 0.114±0.00 12.086±7.98 8.630±5.69 19.109±17.84 6.510±0.00 0.522±0.00 1.683±1.54 27.986±24.27 7.636±6.64 1.861±0.38 36.981±12.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0007411 TAS axon guidance
GO:0031225 IEA anchored component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139780 Rgma-003 processed_transcript Mus_musculus 0 1676
ENSMUST00000094312 Rgma-001 protein_coding Mus_musculus 0 1574
ENSMUST00000119206 Rgma-002 protein_coding Mus_musculus 0 1365
ENSMUST00000128471 Rgma-004 protein_coding Mus_musculus 0 497

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