C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: programmed cell death 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542896 PDCD2-006 ENSG00000071994 9606 - 6:170578482-170584612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungENST00000542896
Transcript ID Kidney Lung
ENST00000542896 2.892±0.00 2.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DG CIL_0008DG_0001 VISTA 6:170138007-170739776
CIL_00018F CIL_00018F_0001 CGP 6:170554302-170584692

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054450 Pdcd2-001 protein_coding Mus_musculus 0 793
ENSMUST00000125709 Pdcd2-005 retained_intron Mus_musculus 4e-37 159
ENSMUST00000162505 Tbp-001 protein_coding Mus_musculus 4e-37 159

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