C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00018F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112592-ENSG00000071994 CGP 9606 6:170554302-170584692
GeneTranscriptPositionBiotype
ENSG00000071994 (PDCD2)
programmed cell death 2 		ENST00000167218 (PDCD2-009) 170577436-170584645 nonsense_mediated_decay
ENST00000392090 (PDCD2-007) 170577559-170584581 protein_coding
ENST00000443345 (PDCD2-004) 170581792-170584654 protein_coding
ENST00000453163 (PDCD2-002) 170581089-170584612 protein_coding
ENST00000537445 (PDCD2-005) 170581745-170584615 protein_coding
ENST00000538195 (PDCD2-014) 170580093-170584226 protein_coding
ENST00000539212 (PDCD2-011) 170578883-170584404 nonsense_mediated_decay
ENST00000541970 (PDCD2-001) 170575295-170584660 protein_coding
ENST00000542896 (PDCD2-006) 170578482-170584612 protein_coding
ENST00000543284 (PDCD2-008) 170575328-170579721 retained_intron
ENST00000544336 (PDCD2-003) 170581747-170584692 nonsense_mediated_decay
ENST00000544755 (PDCD2-013) 170582849-170584421 nonsense_mediated_decay
ENST00000544866 (PDCD2-012) 170578507-170584389 nonsense_mediated_decay
ENST00000545869 (PDCD2-010) 170577594-170584605 nonsense_mediated_decay
ENST00000614056 (PDCD2-201) 170581748-170584692 protein_coding
ENSG00000112592 (TBP)
TATA box binding protein 		ENST00000230354 (TBP-001) 170554379-170572870 protein_coding
ENST00000392092 (TBP-201) 170554333-170572869 protein_coding
ENST00000421512 (TBP-004) 170554302-170566957 protein_coding
ENST00000423353 (TBP-003) 170554605-170562188 protein_coding
ENST00000446829 (TBP-002) 170569612-170572853 protein_coding
ENST00000540980 (TBP-202) 170554333-170572869 protein_coding
ENST00000616883 (TBP-203) 170554333-170572869 protein_coding
CIL_00018F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014767-ENSMUSG00000014767 CGP 10090 17:15499888-15528379
GeneTranscriptPositionBiotype
ENSMUSG00000014767 (Tbp)
TATA box binding protein 		ENSMUST00000014911 (Tbp-003) 15499888-15517427 protein_coding
ENSMUST00000117593 (Tbp-004) 15499960-15517427 protein_coding
ENSMUST00000118001 (Tbp-002) 15499910-15517427 protein_coding
ENSMUST00000119879 (Tbp-011) 15499922-15514372 protein_coding
ENSMUST00000143924 (Tbp-005) 15499912-15507359 protein_coding
ENSMUST00000147081 (Tbp-006) 15499901-15507454 protein_coding
ENSMUST00000149518 (Tbp-009) 15515483-15516935 retained_intron
ENSMUST00000153480 (Tbp-008) 15504583-15516868 protein_coding
ENSMUST00000155051 (Tbp-007) 15499928-15504447 protein_coding
ENSMUST00000159197 (Tbp-010) 15499888-15504605 protein_coding
ENSMUST00000162505 (Tbp-001) 15499888-15528379 protein_coding
ENSMUSG00000014771 (Pdcd2)
programmed cell death 2 		ENSMUST00000054450 (Pdcd2-001) 15521575-15527301 protein_coding
ENSMUST00000125709 (Pdcd2-005) 15521593-15522143 retained_intron
ENSMUST00000137233 (Pdcd2-004) 15522791-15526986 retained_intron
ENSMUST00000139610 (Pdcd2-003) 15522703-15527084 retained_intron
ENSMUST00000154293 (Pdcd2-002) 15519208-15527281 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018F_0001ENSG00000071994ENST00000167218ENST00000392090ENST00000443345ENST00000453163ENST00000537445ENST00000538195ENST00000539212ENST00000541970ENST00000542896ENST00000543284ENST00000544336ENST00000544755ENST00000544866ENST00000545869ENST00000614056ENSG00000112592ENST00000230354ENST00000392092ENST00000421512ENST00000423353ENST00000446829ENST00000540980ENST00000616883CIL_00018F_0002ENSMUSG00000014767ENSMUST00000014911ENSMUST00000117593ENSMUST00000118001ENSMUST00000119879ENSMUST00000143924ENSMUST00000147081ENSMUST00000149518ENSMUST00000153480ENSMUST00000155051ENSMUST00000159197ENSMUST00000162505ENSMUSG00000014771ENSMUST00000054450ENSMUST00000125709ENSMUST00000137233ENSMUST00000139610ENSMUST00000154293
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018F_0001ENSG00000071994ENST00000167218ENST00000392090ENST00000443345ENST00000453163ENST00000537445ENST00000541970ENST00000542896ENST00000543284ENST00000544336ENST00000544866ENST00000545869ENSG00000112592ENST00000230354ENST00000392092ENST00000421512ENST00000423353ENST00000446829ENST00000540980ENST00000616883CIL_00018F_0002ENSMUSG00000014767ENSMUST00000014911ENSMUST00000118001ENSMUST00000119879ENSMUST00000143924ENSMUST00000147081ENSMUST00000162505ENSMUSG00000014771ENSMUST00000054450ENSMUST00000125709ENSMUST00000137233
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071994 ENST00000167218 5.480±0.00 N/A N/A 3.137±0.00 4.756±0.00 5.992±2.24 3.004±1.37 7.470±0.27 6.889±0.00 6.188±0.00 7.062±2.57 22.617±0.00 6.922±1.75 11.214±0.00
ENST00000392090 N/A N/A N/A 2.780±0.00 N/A N/A N/A N/A N/A N/A 2.931±0.00 28.500±19.43 10.026±2.14 11.136±0.00
ENST00000443345 N/A N/A 0.821±0.00 N/A 1.796±0.00 2.024±0.00 N/A 2.766±0.00 2.979±0.00 1.595±0.00 1.521±0.00 N/A N/A N/A
ENST00000453163 N/A N/A N/A 1.666±0.00 N/A 1.513±0.00 0.332±0.00 N/A N/A 1.523±0.00 N/A 6.286±3.21 2.035±0.00 2.339±0.66
ENST00000537445 N/A N/A 1.031±0.00 3.553±0.00 N/A N/A 1.114±0.00 N/A N/A N/A N/A N/A 5.485±0.15 4.190±0.00
ENST00000538195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541970 1.501±0.00 N/A N/A 1.408±0.00 N/A 3.096±0.00 1.823±0.00 3.163±0.00 2.198±0.09 1.245±0.00 1.505±0.00 5.546±0.00 2.450±0.18 4.659±0.00
ENST00000542896 N/A N/A N/A N/A N/A N/A N/A 2.892±0.00 N/A 2.016±0.00 N/A N/A N/A N/A
ENST00000543284 N/A 3.537±0.00 N/A 0.858±0.00 0.974±0.02 0.760±0.00 0.314±0.00 0.998±0.00 1.193±0.00 0.734±0.17 N/A N/A N/A N/A
ENST00000544336 5.614±0.00 N/A N/A 3.952±0.00 3.790±0.00 N/A N/A 5.506±0.00 N/A N/A N/A 29.550±0.00 6.934±0.00 N/A
ENST00000544755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544866 N/A 17.970±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.680±0.00 N/A
ENST00000545869 N/A N/A N/A N/A 8.799±0.00 10.949±0.00 5.299±0.00 10.420±0.00 6.938±0.00 6.334±0.00 N/A 58.353±0.00 9.910±0.00 8.851±0.00
ENST00000614056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000112592 ENST00000230354 0.958±0.00 1.955±0.00 0.414±0.00 0.986±0.67 N/A N/A 0.110±0.00 0.301±0.00 1.869±0.00 N/A N/A 2.835±0.14 2.412±1.56 5.049±0.00
ENST00000392092 N/A N/A N/A N/A 1.334±0.00 1.231±0.00 N/A N/A N/A 1.292±0.00 N/A 2.242±0.51 2.192±0.00 N/A
ENST00000421512 N/A N/A 0.558±0.00 0.917±0.00 N/A N/A 0.326±0.00 N/A 0.908±0.00 0.853±0.20 N/A 5.020±0.00 N/A N/A
ENST00000423353 N/A N/A N/A N/A N/A N/A 0.675±0.00 N/A N/A N/A 0.905±0.00 N/A N/A N/A
ENST00000446829 N/A N/A N/A N/A N/A N/A N/A 1.053±0.00 1.015±0.00 N/A N/A N/A N/A N/A
ENST00000540980 N/A 1.781±0.00 N/A N/A 0.584±0.00 0.681±0.00 N/A 0.608±0.00 N/A N/A 1.048±0.26 N/A 0.943±0.00 N/A
ENST00000616883 1.805±0.00 N/A N/A 1.193±0.30 1.204±0.51 1.188±0.45 2.255±0.00 3.974±0.00 1.716±0.00 1.086±0.00 N/A 6.552±4.41 2.312±0.99 20.601±8.74
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014767 ENSMUST00000014911 2.304±0.67 N/A 2.842±0.30 10.826±1.67 2.535±0.00 N/A 1.753±0.37 2.399±0.00 5.607±1.50 3.568±0.14 2.129±0.40 6.395±0.40 5.555±1.41 21.276±1.19
ENSMUST00000117593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118001 4.081±1.93 10.292±2.15 6.756±0.33 8.088±1.44 5.637±0.42 7.864±1.17 2.121±0.89 6.776±0.77 7.577±3.19 8.026±0.43 0.975±0.00 9.342±1.88 7.297±2.68 18.047±1.68
ENSMUST00000119879 4.972±1.52 8.261±0.00 N/A 8.287±0.00 7.391±0.63 11.859±0.00 3.474±0.15 6.380±0.99 6.244±0.00 7.113±0.37 N/A 14.431±2.64 19.086±3.98 31.792±4.21
ENSMUST00000143924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.522±4.32
ENSMUST00000147081 N/A N/A N/A N/A N/A N/A N/A N/A 5.294±0.00 N/A N/A N/A N/A 26.283±0.00
ENSMUST00000149518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162505 N/A N/A 0.564±0.00 0.742±0.43 N/A N/A 0.186±0.03 N/A 0.484±0.13 N/A 0.158±0.04 0.351±0.00 0.425±0.02 N/A
ENSMUSG00000014771 ENSMUST00000054450 10.960±3.02 40.553±12.41 10.305±0.04 15.281±2.79 22.987±7.30 25.655±4.09 4.425±1.52 14.370±2.69 12.734±2.68 14.173±2.17 6.034±1.60 38.052±10.54 10.722±2.73 N/A
ENSMUST00000125709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.053±0.00 N/A
ENSMUST00000137233 N/A N/A N/A 11.868±0.00 21.177±0.00 N/A N/A N/A N/A N/A N/A 19.239±0.00 26.299±12.61 N/A
ENSMUST00000139610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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