| Transcript ID | Lung |
|---|---|
| ENST00000543356 | 1.253±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000543356  |
GNE-004 |
ENSG00000159921 |
9606 | - |
9:36216943-36277042  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006K2 | CIL_0006K2_0001 | CGP | 9:36169394-36304781 |
| CIL_0006K3 | CIL_0006K3_0001 | CGP | 9:36190856-36304781 |
| CIL_0006K4 | CIL_0006K4_0001 | CGP | 9:36214441-36487548 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004553 | IEA | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005524 | IEA | ATP binding |
| GO:0005737 | TAS | cytoplasm |
| GO:0006045 | IEA | N-acetylglucosamine biosynthetic process |
| GO:0006047 | IEA | UDP-N-acetylglucosamine metabolic process |
| GO:0006054 | TAS | N-acetylneuraminate metabolic process |
| GO:0007155 | TAS | cell adhesion |
| GO:0009384 | IEA | N-acylmannosamine kinase activity |
| GO:0046835 | IEA | carbohydrate phosphorylation |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000102936
|
Gne-002 | protein_coding | Mus_musculus | 0 | 2403 |
|
ENSMUST00000030201
|
Gne-001 | protein_coding | Mus_musculus | 0 | 2403 |
|
ENSMUST00000172533
|
Gne-008 | nonsense_mediated_decay | Mus_musculus | 0 | 2381 |
|
ENSMUST00000174522
|
Gne-007 | nonsense_mediated_decay | Mus_musculus | 0 | 1759 |
|
ENSMUST00000173234
|
Gne-009 | protein_coding | Mus_musculus | 0 | 1541 |
|
ENSMUST00000173274
|
Gne-011 | protein_coding | Mus_musculus | 0 | 870 |
|
ENSMUST00000173976
|
Gne-013 | retained_intron | Mus_musculus | 0 | 612 |
|
ENSMUST00000172514
|
Gne-014 | retained_intron | Mus_musculus | 0 | 562 |
|
ENSMUST00000133709
|
Gne-006 | nonsense_mediated_decay | Mus_musculus | 0 | 484 |
|
ENSMUST00000144985
|
Gne-003 | protein_coding | Mus_musculus | 0 | 427 |
|
ENSMUST00000173569
|
Gne-012 | processed_transcript | Mus_musculus | 0 | 285 |
|
ENSMUST00000173383
|
Gne-010 | protein_coding | Mus_musculus | 0 | 272 |
|
ENSMUST00000128439
|
Gne-004 | protein_coding | Mus_musculus | 6e-29 | 134 |
|
ENSMUST00000140724
|
Gne-005 | protein_coding | Mus_musculus | 1e-26 | 126 |
