C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172533 Gne-008 ENSMUSG00000028479 10090 - 4:44036830-44066920 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverOvaryPlacentaTestisENSMUST00000172533
Transcript ID Breast Colon Heart Liver Ovary Placenta Testis
ENSMUST00000172533 2.917±0.00 29.450±5.08 0.740±0.00 5.018±1.69 1.808±0.08 3.118±0.00 0.229±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K3 CIL_0006K3_0002 CGP 4:44004452-44084177
CIL_0006K4 CIL_0006K4_0002 CGP 4:44034075-44233789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 ISS catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0006047 IEA UDP-N-acetylglucosamine metabolic process
GO:0006054 TAS N-acetylneuraminate metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377902 GNE-001 protein_coding Homo_sapiens 0 2516
ENST00000396594 GNE-003 protein_coding Homo_sapiens 0 2516
ENST00000447283 GNE-005 protein_coding Homo_sapiens 0 1674
ENST00000539208 GNE-002 protein_coding Homo_sapiens 0 1650
ENST00000539815 GNE-201 protein_coding Homo_sapiens 0 2516
ENST00000543356 GNE-004 protein_coding Homo_sapiens 0 2381

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