C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173234 Gne-009 ENSMUSG00000028479 10090 - 4:44036958-44066960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173234
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173234 3.510±1.44 2.711±0.33 3.326±0.28 58.275±12.11 1.444±0.34 3.250±0.59 10.842±2.10 4.992±0.38 0.421±0.00 4.220±1.08 2.060±0.00 0.291±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K3 CIL_0006K3_0002 CGP 4:44004452-44084177
CIL_0006K4 CIL_0006K4_0002 CGP 4:44034075-44233789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 ISS catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0006047 IEA UDP-N-acetylglucosamine metabolic process
GO:0006054 TAS N-acetylneuraminate metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377902 GNE-001 protein_coding Homo_sapiens 0 1711
ENST00000396594 GNE-003 protein_coding Homo_sapiens 0 1711
ENST00000447283 GNE-005 protein_coding Homo_sapiens 0 2351
ENST00000539208 GNE-002 protein_coding Homo_sapiens 0 809
ENST00000539815 GNE-201 protein_coding Homo_sapiens 0 1709
ENST00000543356 GNE-004 protein_coding Homo_sapiens 0 1541

Loading