C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030201 Gne-001 ENSMUSG00000028479 10090 - 4:44034075-44084177 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030201
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030201 2.762±0.00 1.077±0.20 2.234±0.26 3.019±0.92 1.705±0.23 31.394±5.20 1.531±0.46 2.060±0.79 2.665±0.18 0.405±0.00 1.863±0.40 2.336±0.75 0.157±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K3 CIL_0006K3_0002 CGP 4:44004452-44084177
CIL_0006K4 CIL_0006K4_0002 CGP 4:44034075-44233789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 ISS catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0006045 IEA N-acetylglucosamine biosynthetic process
GO:0006047 IEA UDP-N-acetylglucosamine metabolic process
GO:0006054 TAS N-acetylneuraminate metabolic process
GO:0008761 IEA UDP-N-acetylglucosamine 2-epimerase activity
GO:0009384 IEA N-acylmannosamine kinase activity
GO:0046835 IEA carbohydrate phosphorylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377902 GNE-001 protein_coding Homo_sapiens 0 2573
ENST00000396594 GNE-003 protein_coding Homo_sapiens 0 2591
ENST00000447283 GNE-005 protein_coding Homo_sapiens 0 1712
ENST00000539208 GNE-002 protein_coding Homo_sapiens 0 1672
ENST00000539815 GNE-201 protein_coding Homo_sapiens 0 2571
ENST00000543356 GNE-004 protein_coding Homo_sapiens 0 2403

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