C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 29 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546588 VPS29-005 ENSG00000111237 9606 - 12:110491691-110502092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000546588
Transcript ID Muscle
ENST00000546588 2.182±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118830 Vps29-002 protein_coding Mus_musculus 0 867
ENSMUST00000155671 Vps29-001 protein_coding Mus_musculus 0 843
ENSMUST00000111729 Vps29-003 nonsense_mediated_decay Mus_musculus 0 813
ENSMUST00000117868 Vps29-007 protein_coding Mus_musculus 0 575
ENSMUST00000154686 Vps29-005 nonsense_mediated_decay Mus_musculus 0 569
ENSMUST00000132785 Vps29-006 processed_transcript Mus_musculus 0 518
ENSMUST00000145821 Vps29-004 protein_coding Mus_musculus 0 429

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