C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547203 RP11-153M3.1-001 ENSG00000257576 9606 + 12:56511002-56512703 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000547203
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000547203 0.033±0.00 0.170±0.00 0.090±0.00 0.055±0.02 0.089±0.00 0.098±0.00 0.032±0.01 0.073±0.00 0.054±0.00 0.083±0.06 0.006±0.00 0.055±0.03 0.038±0.03 0.171±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027123 Hspd1-001 protein_coding Mus_musculus 0 2104
ENSMUST00000119713 Gm12141-001 processed_pseudogene Mus_musculus 0 2098
ENSMUST00000121815 Gm12725-001 processed_pseudogene Mus_musculus 0 1677
ENSMUST00000122013 Gm12608-001 processed_pseudogene Mus_musculus 0 1319
ENSMUST00000121528 Gm14935-001 processed_pseudogene Mus_musculus 0 1125
ENSMUST00000189212 RP23-274N9.1-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000127861 Hspd1-002 protein_coding Mus_musculus 0 782
ENSMUST00000144077 Hspd1-003 protein_coding Mus_musculus 0 536
ENSMUST00000169520 Gm17101-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000118299 Gm12667-001 processed_pseudogene Mus_musculus 0 324

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