C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547512 RP11-416A17.6-001 ENSG00000257246 9606 - 12:51124628-51125381 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000547512
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000547512 0.085±0.00 0.204±0.00 0.552±0.00 0.123±0.00 0.287±0.07 0.122±0.01 0.115±0.03 0.023±0.00 0.522±0.50 0.042±0.00 0.137±0.00 0.282±0.16 0.112±0.00 0.306±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033J CIL_00033J_0002 CGP 12:51061205-51173134
CIL_00033K CIL_00033K_0002 CGP 12:51093663-51217693

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117522 1700071K01Rik-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000125172 Phb-001 protein_coding Mus_musculus 0 592
ENSMUST00000146631 Gm7666-001 transcribed_processed_pseudogene Mus_musculus 0 586
ENSMUST00000036374 Phb-002 protein_coding Mus_musculus 0 586
ENSMUST00000117258 Gm7781-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000122042 Gm4996-001 processed_pseudogene Mus_musculus 0 388

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