C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | chromosome 17 open reading frame 49 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000547747  |
C17orf49-007 |
ENSG00000258315 |
9606 | + |
17:7015843-7017521  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006SP | CIL_0006SP_0002 | CGP | 17:7012417-7017520 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000102569
|
0610010K14Rik-011 | protein_coding | Mus_musculus | 0 | 379 |
|
ENSMUST00000108578
|
0610010K14Rik-003 | protein_coding | Mus_musculus | 0 | 379 |
|
ENSMUST00000176116
|
Gm21988-001 | nonsense_mediated_decay | Mus_musculus | 0 | 361 |
|
ENSMUST00000176268
|
Gm21988-002 | nonsense_mediated_decay | Mus_musculus | 0 | 326 |
|
ENSMUST00000108576
|
0610010K14Rik-001 | protein_coding | Mus_musculus | 0 | 224 |
|
ENSMUST00000135390
|
0610010K14Rik-010 | protein_coding | Mus_musculus | 1e-38 | 163 |
|
ENSMUST00000021180
|
0610010K14Rik-014 | nonsense_mediated_decay | Mus_musculus | 9e-20 | 100 |
|
ENSMUST00000100950
|
0610010K14Rik-004 | protein_coding | Mus_musculus | 4e-18 | 95 |
|
ENSMUST00000021181
|
0610010K14Rik-008 | protein_coding | Mus_musculus | 4e-18 | 95 |
|
ENSMUST00000134700
|
0610010K14Rik-009 | protein_coding | Mus_musculus | 0.000000000000003 | 86 |
|
ENSMUST00000150504
|
0610010K14Rik-007 | retained_intron | Mus_musculus | 0.00000001 | 64 |
