C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 29 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548259 VPS29-007 ENSG00000111237 9606 - 12:110492921-110502108 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungOvaryPlacentaENST00000548259
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000548259 19.990±0.00 18.749±0.00 14.218±8.36 1.894±0.00 26.518±0.00 4.830±0.00 4.880±0.00 10.447±0.00 10.820±2.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117868 Vps29-007 protein_coding Mus_musculus 0 660
ENSMUST00000155671 Vps29-001 protein_coding Mus_musculus 0 652
ENSMUST00000118830 Vps29-002 protein_coding Mus_musculus 0 597
ENSMUST00000154686 Vps29-005 nonsense_mediated_decay Mus_musculus 0 571
ENSMUST00000111729 Vps29-003 nonsense_mediated_decay Mus_musculus 0 553
ENSMUST00000132785 Vps29-006 processed_transcript Mus_musculus 0 520
ENSMUST00000145821 Vps29-004 protein_coding Mus_musculus 0 431

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