C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted pseudogene 5915
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116136 Gm5915-001 ENSMUSG00000080021 10090 - 8:105660334-105660787 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116136
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116136 2.569±0.73 1.076±0.42 1.072±0.22 0.803±0.37 1.721±0.29 2.777±2.12 2.156±0.44 4.402±2.62 1.617±1.27 5.641±1.57 0.164±0.01 2.760±2.38 1.274±0.55 1.113±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LR CIL_0003LR_0003 CGP 8:105605229-105682922
CIL_0006LW CIL_0006LW_0003 CGP 8:105636568-105698178

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293422 MYL6-023 protein_coding Homo_sapiens 0 688
ENST00000348108 MYL6-024 protein_coding Homo_sapiens 0 664
ENST00000354968 MYL4-201 protein_coding Homo_sapiens 0 257
ENST00000393450 MYL4-001 protein_coding Homo_sapiens 0 257
ENST00000405661 MYL6B-002 retained_intron Homo_sapiens 0 309
ENST00000429485 AC016697.2-001 processed_pseudogene Homo_sapiens 0 195
ENST00000436904 MYL6P3-001 processed_pseudogene Homo_sapiens 0 460
ENST00000449877 MYL6P1-001 processed_pseudogene Homo_sapiens 0 446
ENST00000450079 MYL6P2-001 processed_pseudogene Homo_sapiens 0 375
ENST00000536128 MYL6-005 protein_coding Homo_sapiens 0 662
ENST00000536623 MYL4-004 protein_coding Homo_sapiens 0 257
ENST00000546630 MYL6-021 retained_intron Homo_sapiens 0 274
ENST00000546845 MYL6-009 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000547408 MYL6-007 protein_coding Homo_sapiens 0 662
ENST00000547649 MYL6-002 protein_coding Homo_sapiens 0 688
ENST00000547703 MYL6-012 retained_intron Homo_sapiens 0 327
ENST00000548293 MYL6-010 protein_coding Homo_sapiens 0 664
ENST00000548400 MYL6-018 protein_coding Homo_sapiens 0 392
ENST00000548580 MYL6-014 protein_coding Homo_sapiens 0 416
ENST00000548725 MYL6-015 retained_intron Homo_sapiens 0 538
ENST00000549017 MYL6-025 protein_coding Homo_sapiens 0 340
ENST00000549178 MYL6B-006 retained_intron Homo_sapiens 0 344
ENST00000549392 MYL6-022 protein_coding Homo_sapiens 0 577
ENST00000549566 MYL6-013 protein_coding Homo_sapiens 0 416
ENST00000550152 MYL6B-005 processed_transcript Homo_sapiens 0 307
ENST00000550184 MYL6-004 retained_intron Homo_sapiens 0 634
ENST00000550443 MYL6B-001 protein_coding Homo_sapiens 0 351
ENST00000550639 MYL6-017 processed_transcript Homo_sapiens 0 501
ENST00000550697 MYL6-003 protein_coding Homo_sapiens 0 664
ENST00000551589 MYL6-001 protein_coding Homo_sapiens 0 662
ENST00000552297 MYL6-016 processed_transcript Homo_sapiens 0 390
ENST00000552568 MYL6B-011 protein_coding Homo_sapiens 0 270
ENST00000553066 MYL6B-003 protein_coding Homo_sapiens 0 351
ENST00000570772 MYL4-008 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000571981 MYL4-007 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000572303 MYL4-005 protein_coding Homo_sapiens 9e-36 154
ENST00000572316 MYL4-002 protein_coding Homo_sapiens 0 257
ENST00000573747 MYL4-009 nonsense_mediated_decay Homo_sapiens 7e-18 95
ENST00000576874 MYL4-003 protein_coding Homo_sapiens 0 233

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