C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB5B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549505 RAB5B-002 ENSG00000111540 9606 + 12:55974074-55994706 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000549505
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000549505 24.626±0.00 15.753±0.00 10.218±0.00 19.770±0.00 24.304±0.00 9.766±0.00 11.475±0.00 7.504±0.00 12.774±0.00 11.345±0.00 17.764±4.56 10.687±0.29 20.705±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000727 Rab5b-201 protein_coding Mus_musculus 0 1050
ENSMUST00000120190 Gm13991-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000155843 Rab5c-004 protein_coding Mus_musculus 1e-21 110
ENSMUST00000019317 Rab5c-002 protein_coding Mus_musculus 1e-21 110
ENSMUST00000107364 Rab5c-001 protein_coding Mus_musculus 1e-21 110

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