| Transcript ID | Muscle |
|---|---|
| ENSMUST00000019317 | 1.515±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RAB5C, member RAS oncogene family | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000019317  |
Rab5c-002 |
ENSMUSG00000019173 |
10090 | - |
11:100715011-100738215  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002IY | CIL_0002IY_0002 | CGP | 11:100713850-100738215 |
| CIL_0002J1 | CIL_0002J1_0002 | CGP | 11:100715009-100759942 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003924 | TAS | GTPase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005525 | IEA | GTP binding |
| GO:0006184 | TAS | GTP catabolic process |
| GO:0007032 | IDA | endosome organization |
| GO:0007264 | IEA | small GTPase mediated signal transduction |
| GO:0015031 | IEA | protein transport |
| GO:0030100 | IDA | regulation of endocytosis |
| GO:0030139 | IDA | endocytic vesicle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000346213
|
RAB5C-001 | protein_coding | Homo_sapiens | 0 | 1050 |
|
ENST00000360299
|
RAB5B-001 | protein_coding | Homo_sapiens | 0 | 305 |
|
ENST00000393860
|
RAB5C-201 | protein_coding | Homo_sapiens | 0 | 1050 |
|
ENST00000448789
|
RAB5B-003 | protein_coding | Homo_sapiens | 0 | 233 |
|
ENST00000546810
|
RAB5B-008 | retained_intron | Homo_sapiens | 0 | 233 |
|
ENST00000546881
|
RAB5C-007 | retained_intron | Homo_sapiens | 0 | 579 |
|
ENST00000547517
|
RAB5C-002 | protein_coding | Homo_sapiens | 0 | 686 |
|
ENST00000548068
|
RAB5B-005 | protein_coding | Homo_sapiens | 0 | 241 |
|
ENST00000549505
|
RAB5B-002 | nonsense_mediated_decay | Homo_sapiens | 1e-21 | 110 |
|
ENST00000550013
|
RAB5C-003 | retained_intron | Homo_sapiens | 0 | 427 |
|
ENST00000550406
|
RAB5C-008 | protein_coding | Homo_sapiens | 0 | 372 |
|
ENST00000550504
|
RAB5C-004 | protein_coding | Homo_sapiens | 0 | 446 |
|
ENST00000551338
|
RAB5C-006 | protein_coding | Homo_sapiens | 0 | 344 |
|
ENST00000551459
|
RAB5B-007 | protein_coding | Homo_sapiens | 0 | 228 |
|
ENST00000552162
|
RAB5C-005 | protein_coding | Homo_sapiens | 0 | 590 |
|
ENST00000553116
|
RAB5B-004 | protein_coding | Homo_sapiens | 0 | 305 |
|
ENST00000585562
|
CTD-2132N18.3-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 274 |
|
ENST00000592248
|
CTD-2132N18.3-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 660 |
|
ENST00000592574
|
CTD-2132N18.3-001 | protein_coding | Homo_sapiens | 0 | 704 |
