C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding and coiled-coil domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549935 CALCOCO1-007 ENSG00000012822 9606 - 12:53713170-53727452 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyOvaryTestisENST00000549935
Transcript ID Breast Colon Kidney Ovary Testis
ENST00000549935 3.398±0.00 3.776±0.00 0.930±0.00 5.480±3.28 4.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0001 VISTA 12:53396852-53997557
CIL_00003I CIL_00003I_0001 CGP 12:53632726-53727745
CIL_00033H CIL_00033H_0003 CGP 12:53708517-53946544

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171838 Calcoco1-002 protein_coding Mus_musculus 0 1836
ENSMUST00000023818 Calcoco1-001 protein_coding Mus_musculus 0 1836
ENSMUST00000166943 Calcoco1-004 retained_intron Mus_musculus 0 750
ENSMUST00000168112 Calcoco1-003 protein_coding Mus_musculus 0 268

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