C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 29 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549970 VPS29-006 ENSG00000111237 9606 - 12:110491886-110502111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000549970
Transcript ID Adipose Adrenal Bladder Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000549970 17.022±0.00 18.306±0.00 2.177±0.00 5.830±0.00 4.006±2.70 15.056±0.00 9.320±2.22 10.785±6.66 13.082±2.98 12.392±7.07 16.166±2.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155671 Vps29-001 protein_coding Mus_musculus 0 782
ENSMUST00000118830 Vps29-002 protein_coding Mus_musculus 0 780
ENSMUST00000111729 Vps29-003 nonsense_mediated_decay Mus_musculus 0 758
ENSMUST00000117868 Vps29-007 protein_coding Mus_musculus 0 577
ENSMUST00000154686 Vps29-005 nonsense_mediated_decay Mus_musculus 0 573
ENSMUST00000132785 Vps29-006 processed_transcript Mus_musculus 0 523
ENSMUST00000145821 Vps29-004 protein_coding Mus_musculus 0 431

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