C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease, RNase K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552039 RNASEK-007 ENSG00000219200 9606 + 17:7012632-7014532 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000552039
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000552039 92.674±0.00 118.880±0.00 90.691±0.00 88.416±0.00 30.301±23.81 52.674±0.00 85.023±72.07 57.822±0.00 232.905±0.00 48.401±0.00 120.208±33.36 150.597±50.13 88.960±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SP CIL_0006SP_0002 CGP 17:7012417-7017520

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176116 Gm21988-001 nonsense_mediated_decay Mus_musculus 0 477
ENSMUST00000176268 Gm21988-002 nonsense_mediated_decay Mus_musculus 0 459
ENSMUST00000040428 Rnasek-001 protein_coding Mus_musculus 0 459
ENSMUST00000141880 Rnasek-003 protein_coding Mus_musculus 0 351
ENSMUST00000125752 Rnasek-002 nonsense_mediated_decay Mus_musculus 0 351

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