C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554390 SMEK1-002 ENSG00000100796 9606 - 14:91462054-91510480 non_stop_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000554390
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000554390 2.524±0.00 2.899±0.00 6.580±0.00 4.474±0.00 1.448±0.00 2.499±0.00 2.361±0.00 6.575±0.00 1.484±0.00 7.413±3.60 8.376±5.74 30.459±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AE CIL_0000AE_0001 CGP 14:91271323-91510554
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048305 Smek1-201 protein_coding Mus_musculus 0 3463
ENSMUST00000163095 Smek1-202 protein_coding Mus_musculus 0 2148

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