C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554684 SMEK1-001 ENSG00000100796 9606 - 14:91457611-91510144 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000554684
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000554684 3.447±0.00 2.815±0.00 2.210±0.26 2.836±0.00 2.082±0.07 4.026±0.00 5.390±3.93 2.262±1.21 3.736±0.00 5.534±2.64 3.308±0.00 7.637±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AE CIL_0000AE_0001 CGP 14:91271323-91510554
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006470 IEA protein dephosphorylation
GO:0030289 IEA protein phosphatase 4 complex
GO:0045722 IEA positive regulation of gluconeogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048305 Smek1-201 protein_coding Mus_musculus 0 5243
ENSMUST00000163095 Smek1-202 protein_coding Mus_musculus 0 3358
ENSDART00000110069 CSRNP3-201 protein_coding Danio_rerio 0.00003 55

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