C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell growth regulator with ring finger domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554791 CGRRF1-009 ENSG00000100532 9606 + 14:54509812-54538281 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverLungOvaryPlacentaTestisENST00000554791
Transcript ID Adipose Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000554791 1.662±0.00 4.837±0.00 2.464±0.00 1.435±0.52 0.782±0.00 1.661±0.00 2.778±0.00 4.258±0.00 13.460±5.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0001 VISTA 14:53920865-54521777
CIL_00090Z CIL_00090Z_0001 VISTA 14:53923660-54524764
CIL_0000HK CIL_0000HK_0001 CGP 14:54474484-54539309
CIL_0004OT CIL_0004OT_0001 CGP 14:54509812-54793315

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133790 Cgrrf1-003 retained_intron Mus_musculus 0 348
ENSMUST00000133989 Cgrrf1-004 retained_intron Mus_musculus 0 348
ENSMUST00000140114 Cgrrf1-002 retained_intron Mus_musculus 0 348
ENSMUST00000068532 Cgrrf1-001 protein_coding Mus_musculus 0 348

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