C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554943 SMEK1-007 ENSG00000100796 9606 - 14:91458008-91509763 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000554943
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000554943 1.969±0.00 4.991±0.00 1.168±0.19 2.999±0.06 2.740±0.00 1.778±1.24 2.050±0.00 2.092±0.17 1.283±0.87 3.257±1.32 4.692±1.01 9.262±3.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AE CIL_0000AE_0001 CGP 14:91271323-91510554
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163095 Smek1-202 protein_coding Mus_musculus 0 4710
ENSMUST00000048305 Smek1-201 protein_coding Mus_musculus 0 2752
ENSDART00000110069 CSRNP3-201 protein_coding Danio_rerio 0.00003 55

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