C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555462 SMEK1-003 ENSG00000100796 9606 - 14:91458139-91510478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000555462
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000555462 2.711±0.00 4.033±0.00 2.148±0.00 2.008±0.00 2.806±0.00 2.448±0.26 4.534±0.00 1.251±0.00 4.598±0.00 1.490±0.39 4.840±2.68 6.471±0.00 9.847±6.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AE CIL_0000AE_0001 CGP 14:91271323-91510554
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163095 Smek1-202 protein_coding Mus_musculus 0 3203
ENSMUST00000048305 Smek1-201 protein_coding Mus_musculus 0 2586
ENSDART00000110069 CSRNP3-201 protein_coding Danio_rerio 0.00003 55

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