C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vesicle transport through interaction with t-SNAREs 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555543 VTI1B-003 ENSG00000100568 9606 - 14:67656510-67674820 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000555543
Transcript ID Muscle
ENST00000555543 39.442±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CL CIL_0002CL_0001 CGP 14:67581955-67651720
CIL_0001KL CIL_0001KL_0002 CGP 14:67619798-67674831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162789 Vti1b-002 nonsense_mediated_decay Mus_musculus 0 518
ENSMUST00000162569 Vti1b-004 protein_coding Mus_musculus 0 318
ENSMUST00000055262 Vti1b-001 protein_coding Mus_musculus 0 318
ENSMUST00000163031 Vti1b-003 nonsense_mediated_decay Mus_musculus 0 226

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