C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556765 TRAPPC6B-005 ENSG00000182400 9606 - 14:39151811-39170430 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungMuscleOvaryENST00000556765
Transcript ID Brain Colon Heart Liver Lung Muscle Ovary
ENST00000556765 13.605±0.00 4.379±0.00 4.642±0.00 11.127±0.00 7.099±0.00 2.175±0.00 6.525±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VX CIL_0003VX_0001 CGP 14:39114223-39170532
CIL_0003VY CIL_0003VY_0001 CGP 14:39147811-39183218

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021380 Trappc6b-201 protein_coding Mus_musculus 0 215
ENSMUST00000118421 Gm13880-001 processed_pseudogene Mus_musculus 0 213

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