C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557382 SMEK1-014 ENSG00000100796 9606 - 14:91458330-91461684 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000557382
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000557382 8.790±0.00 22.989±0.00 10.385±0.00 8.131±0.00 13.017±0.00 8.426±0.00 10.524±4.36 6.115±0.00 10.593±0.00 3.816±1.76 20.786±0.00 18.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AE CIL_0000AE_0001 CGP 14:91271323-91510554
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048305 Smek1-201 protein_coding Mus_musculus 0 1024
ENSMUST00000163095 Smek1-202 protein_coding Mus_musculus 0 1024
ENSDART00000110069 CSRNP3-201 protein_coding Danio_rerio 0.00003 55

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