C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell growth regulator with ring finger domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557512 CGRRF1-007 ENSG00000100532 9606 + 14:54510126-54538247 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000557512
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000557512 2.180±0.00 3.818±0.00 6.122±0.00 2.794±0.00 2.863±0.00 1.204±0.00 3.908±0.00 0.557±0.00 1.109±0.00 5.198±0.00 4.236±0.00 2.048±0.82 7.324±1.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0001 VISTA 14:53920865-54521777
CIL_00090Z CIL_00090Z_0001 VISTA 14:53923660-54524764
CIL_0000HK CIL_0000HK_0001 CGP 14:54474484-54539309
CIL_0004OT CIL_0004OT_0001 CGP 14:54509812-54793315

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068532 Cgrrf1-001 protein_coding Mus_musculus 0 765
ENSMUST00000133989 Cgrrf1-004 retained_intron Mus_musculus 0 521
ENSMUST00000133790 Cgrrf1-003 retained_intron Mus_musculus 0 315
ENSMUST00000140114 Cgrrf1-002 retained_intron Mus_musculus 0 198

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