C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide A'
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558036 SNRPA1-002 ENSG00000131876 9606 - 15:101281514-101295282 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungOvaryENST00000558036
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Ovary
ENST00000558036 0.935±0.00 6.625±0.00 2.503±0.00 0.750±0.00 0.845±0.00 0.654±0.04 0.428±0.00 1.793±0.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139082 Snrpa1-003 retained_intron Mus_musculus 0 819
ENSMUST00000153609 Snrpa1-001 protein_coding Mus_musculus 0 640
ENSMUST00000032723 Snrpa1-002 nonsense_mediated_decay Mus_musculus 0 617
ENSMUST00000123157 Snrpa1-004 processed_transcript Mus_musculus 0 505

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