C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Hepatoma-derived growth factor-related protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563790 HDGFRP3-004 ENSG00000166503 9606 - 15:83139132-83207541 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000563790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000563790 25.167±0.00 18.289±0.00 4.350±0.00 35.786±15.12 5.553±0.06 14.241±11.75 9.051±6.48 9.960±0.00 4.942±4.34 18.935±0.00 8.783±8.49 5.271±0.78 42.293±0.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L6 CIL_0001L6_0001 CGP 15:83107407-83208018
CIL_00037Q CIL_00037Q_0001 CGP 15:83112738-83284716

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107305 Hdgfrp3-001 protein_coding Mus_musculus 0 911
ENSMUST00000026094 Hdgfrp3-002 protein_coding Mus_musculus 0 769
ENSMUST00000149288 Hdgfrp3-003 retained_intron Mus_musculus 0 575
ENSMUST00000002911 Hdgfrp2-201 protein_coding Mus_musculus 0.00000000000008 82

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