C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuolar protein sorting 39 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000564994  |
VPS39-013 |
ENSG00000166887 |
9606 | - |
15:42160431-42162052  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005PN | CIL_0005PN_0001 | CGP | 15:42139034-42208316 |
| CIL_0005PM | CIL_0005PM_0001 | CGP | 15:42158701-42273663 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000129857
|
Vps39-003 | processed_transcript | Mus_musculus | 5e-39 | 165 |
|
ENSMUST00000028752
|
Vps39-002 | protein_coding | Mus_musculus | 5e-39 | 165 |
|
ENSMUST00000102501
|
Vps39-001 | protein_coding | Mus_musculus | 5e-39 | 165 |
|
ENSMUST00000133260
|
Vps39-010 | retained_intron | Mus_musculus | 6e-33 | 145 |
