C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuolar protein sorting 39 (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000133260  |
Vps39-010 |
ENSMUSG00000027291 |
10090 | - |
2:120318027-120319582  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005PN | CIL_0005PN_0002 | CGP | 2:120299957-120353137 |
| CIL_0005PM | CIL_0005PM_0002 | CGP | 2:120316461-120404113 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000318006
|
VPS39-001 | protein_coding | Homo_sapiens | 0 | 248 |
|
ENST00000348544
|
VPS39-002 | protein_coding | Homo_sapiens | 0 | 241 |
|
ENST00000562258
|
VPS39-003 | retained_intron | Homo_sapiens | 0 | 248 |
|
ENST00000562662
|
VPS39-011 | retained_intron | Homo_sapiens | 0.0000000000005 | 79 |
|
ENST00000564994
|
VPS39-013 | nonsense_mediated_decay | Homo_sapiens | 6e-33 | 145 |
|
ENST00000568755
|
VPS39-012 | retained_intron | Homo_sapiens | 0.000000000000001 | 88 |
