C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 3B (BRIGHT-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566147 ARID3B-004 ENSG00000179361 9606 + 15:74544350-74591408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonMuscleENST00000566147
Transcript ID Bladder Brain Breast Colon Muscle
ENST00000566147 1.495±0.00 0.535±0.00 1.679±0.00 3.000±0.00 1.842±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0001 VISTA 15:74278506-74880453

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004780 Arid3b-201 protein_coding Mus_musculus 0 475
ENSMUST00000098686 Arid3b-002 protein_coding Mus_musculus 0 475
ENSMUST00000114165 Arid3b-005 nonsense_mediated_decay Mus_musculus 0 475
ENSMUST00000171444 Arid3b-001 protein_coding Mus_musculus 0 475
ENSMUST00000164035 Arid3b-003 nonsense_mediated_decay Mus_musculus 0 473
ENSDART00000103470 arid3b-201 protein_coding Danio_rerio 0 294
ENSMUST00000167670 Arid3b-004 retained_intron Mus_musculus 3e-36 156
ENSMUST00000164010 Arid3b-006 protein_coding Mus_musculus 3e-36 156
ENSMUST00000170477 Arid3b-007 protein_coding Mus_musculus 1e-19 100

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