C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 3B (Bright like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000103470 arid3b-201 ENSDARG00000070474 7955 - 25:29854664-30046114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000103470
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000103470 0.509±0.16 0.357±0.32 4.158±1.50 0.278±0.00 0.100±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004780 Arid3b-201 protein_coding Mus_musculus 0 320
ENSMUST00000098686 Arid3b-002 protein_coding Mus_musculus 0 320
ENSMUST00000114165 Arid3b-005 nonsense_mediated_decay Mus_musculus 0 300
ENSMUST00000164035 Arid3b-003 nonsense_mediated_decay Mus_musculus 0 267
ENSMUST00000171444 Arid3b-001 protein_coding Mus_musculus 0 320
ENST00000346246 ARID3B-001 protein_coding Homo_sapiens 0 359
ENST00000448213 RP5-837I24.1-001 processed_pseudogene Homo_sapiens 0 324
ENST00000566147 ARID3B-004 protein_coding Homo_sapiens 0 294
ENST00000622429 ARID3B-201 protein_coding Homo_sapiens 0 359

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