C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566564 MMP2-005 ENSG00000087245 9606 + 16:55505375-55506239 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENST00000566564
Transcript ID Brain Liver
ENST00000566564 1.338±0.00 4.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0002 UCNEbase 16:51906374-55391377
CIL_00098A CIL_00098A_0001 VISTA 16:54889273-55490371
CIL_000987 CIL_000987_0001 VISTA 16:54906681-55507962
CIL_0007WY CIL_0007WY_0001 VISTA 16:54995377-55596848
CIL_000988 CIL_000988_0001 VISTA 16:55084120-55684969
CIL_00098D CIL_00098D_0001 VISTA 16:55090504-55691826
CIL_0001GQ CIL_0001GQ_0001 CGP 16:55323760-55506691
CIL_0005P6 CIL_0005P6_0001 CGP 16:55389700-55586670

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034187 Mmp2-201 protein_coding Mus_musculus 2e-31 139

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