C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159387-ENSG00000087245 CGP 9606 16:55323760-55506691
GeneTranscriptPositionBiotype
ENSG00000087245 (MMP2)
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) 		ENST00000219070 (MMP2-001) 55478971-55506691 protein_coding
ENST00000437642 (MMP2-003) 55481557-55505759 protein_coding
ENST00000543485 (MMP2-002) 55480533-55505525 protein_coding
ENST00000564864 (MMP2-004) 55479998-55485776 protein_coding
ENST00000566564 (MMP2-005) 55505375-55506239 nonsense_mediated_decay
ENST00000568715 (MMP2-007) 55478830-55485352 protein_coding
ENST00000570283 (MMP2-006) 55488662-55502889 protein_coding
ENST00000570308 (MMP2-008) 55389700-55506237 protein_coding
ENSG00000159387 (IRX6)
iroquois homeobox 6 		ENST00000290552 (IRX6-001) 55323760-55330760 protein_coding
ENST00000558315 (IRX6-002) 55325800-55327796 processed_transcript
ENSG00000259283 (RP11-26L20.3)
 ENST00000558730 (RP11-26L20.3-001) 55259969-55333588 antisense
ENSG00000260135 (RP11-212I21.2)
 ENST00000565307 (RP11-212I21.2-002) 55429135-55444759 lincRNA
ENST00000569037 (RP11-212I21.2-001) 55427558-55462297 lincRNA
ENST00000620495 (RP11-212I21.2-003) 55426797-55427951 lincRNA
ENSG00000263207 (RP11-26L20.4)
 ENST00000573934 (RP11-26L20.4-001) 55332355-55332967 lincRNA
ENSG00000274508 (RP11-212I21.5)
 ENST00000611626 (RP11-212I21.5-001) 55425574-55426130 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001GQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031738-ENSMUSG00000031740 CGP 10090 8:92674288-92853417
GeneTranscriptPositionBiotype
ENSMUSG00000031738 (Irx6)
Iroquois related homeobox 6 (Drosophila) 		ENSMUST00000034185 (Irx6-001) 92674288-92680956 protein_coding
ENSMUST00000167261 (Irx6-002) 92674826-92680956 protein_coding
ENSMUSG00000031740 (Mmp2)
matrix metallopeptidase 2 		ENSMUST00000034187 (Mmp2-201) 92827328-92853417 protein_coding
ENSMUSG00000078967 (Gm3272)
predicted pseudogene 3272 		ENSMUST00000181181 (Gm3272-001) 92715747-92716975 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GQ_0001ENSG00000087245ENST00000219070ENST00000437642ENST00000543485ENST00000564864ENST00000566564ENST00000568715ENST00000570283ENST00000570308ENSG00000159387ENST00000290552ENST00000558315ENSG00000259283ENST00000558730ENSG00000260135ENST00000565307ENST00000569037ENST00000620495ENSG00000263207ENST00000573934ENSG00000274508ENST00000611626CIL_0001GQ_0002ENSMUSG00000031738ENSMUST00000034185ENSMUST00000167261ENSMUSG00000031740ENSMUST00000034187ENSMUSG00000078967ENSMUST00000181181
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GQ_0001ENSG00000087245ENST00000219070ENST00000437642ENST00000543485ENST00000564864ENST00000566564ENST00000570283ENST00000570308ENSG00000159387ENST00000290552ENST00000558315ENSG00000259283ENST00000558730ENSG00000260135ENST00000565307ENST00000569037ENST00000620495ENSG00000263207ENST00000573934ENSG00000274508ENST00000611626CIL_0001GQ_0002ENSMUSG00000031738ENSMUST00000034185ENSMUST00000167261ENSMUSG00000031740ENSMUST00000034187ENSMUSG00000078967ENSMUST00000181181
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087245 ENST00000219070 160.351±0.00 4.443±0.00 1.036±0.00 0.197±0.09 20.144±7.78 17.419±12.95 5.071±2.95 1.955±1.59 6.240±5.31 15.342±10.23 3.816±2.06 27.732±21.21 36.056±15.06 13.388±8.95
ENST00000437642 N/A N/A 0.848±0.00 0.150±0.00 N/A N/A 1.994±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000543485 194.921±0.00 9.945±0.00 0.930±0.00 0.927±0.00 27.068±6.17 7.315±0.00 2.005±0.00 4.355±3.42 9.909±0.00 5.236±0.00 1.374±0.00 23.294±11.82 89.904±0.00 N/A
ENST00000564864 N/A N/A 3.199±0.00 N/A 25.877±0.00 N/A N/A 1.581±0.00 20.523±0.00 12.810±0.00 N/A 12.732±0.00 N/A N/A
ENST00000566564 N/A N/A N/A 1.338±0.00 N/A N/A N/A N/A 4.069±0.00 N/A N/A N/A N/A N/A
ENST00000568715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570283 N/A N/A N/A N/A N/A N/A N/A N/A 18.349±0.00 N/A N/A 38.998±0.00 114.880±0.00 23.417±0.00
ENST00000570308 N/A N/A N/A N/A 11.842±0.00 N/A N/A N/A N/A N/A 2.076±0.00 N/A N/A N/A
ENSG00000159387 ENST00000290552 4.461±0.00 0.081±0.00 0.183±0.00 0.013±0.00 8.555±8.29 0.413±0.38 1.912±1.87 0.966±0.00 0.025±0.00 0.269±0.26 1.161±0.00 0.080±0.05 0.070±0.02 0.052±0.00
ENST00000558315 N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A
ENSG00000259283 ENST00000558730 N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000260135 ENST00000565307 N/A N/A N/A N/A 0.214±0.00 N/A 0.053±0.00 N/A N/A N/A N/A 0.063±0.00 0.097±0.00 N/A
ENST00000569037 N/A N/A N/A N/A 0.058±0.00 N/A 0.026±0.00 N/A N/A 0.230±0.00 N/A 0.087±0.00 N/A N/A
ENST00000620495 0.138±0.00 0.058±0.00 N/A 0.065±0.00 0.278±0.00 0.055±0.00 0.025±0.00 0.029±0.00 N/A 0.206±0.00 N/A 0.083±0.00 0.077±0.00 N/A
ENSG00000263207 ENST00000573934 N/A N/A N/A N/A 0.112±0.00 0.232±0.00 0.033±0.00 0.035±0.00 N/A N/A N/A N/A N/A 0.065±0.00
ENSG00000274508 ENST00000611626 N/A 0.267±0.00 N/A N/A N/A N/A 0.098±0.07 N/A N/A N/A N/A N/A 0.114±0.01 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031738 ENSMUST00000034185 N/A N/A N/A 0.575±0.36 0.031±0.02 0.041±0.01 N/A N/A N/A N/A N/A N/A 0.010±0.00 0.046±0.00
ENSMUST00000167261 N/A N/A N/A 0.194±0.04 N/A 0.058±0.03 0.013±0.00 N/A 0.014±0.01 0.017±0.01 N/A N/A 0.002±0.00 0.067±0.01
ENSMUSG00000031740 ENSMUST00000034187 135.853±68.65 11.109±0.75 143.946±12.57 6.292±3.64 189.682±46.05 59.395±7.64 31.927±2.44 8.291±0.98 3.404±1.71 57.402±6.83 9.793±1.72 86.906±23.63 8.473±5.18 1.898±0.71
ENSMUSG00000078967 ENSMUST00000181181 0.326±0.04 0.694±0.15 0.213±0.05 1.534±1.43 0.369±0.17 0.265±0.14 0.430±0.13 0.735±0.15 0.428±0.36 0.432±0.06 0.998±0.23 0.430±0.23 0.273±0.18 0.426±0.03

Loading