C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159387-ENSG00000087245 CGP 9606 16:55323760-55506691
GeneTranscriptPositionBiotype
ENSG00000087245 (MMP2)
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) 		ENST00000219070 (MMP2-001) 55478971-55506691 protein_coding
ENST00000437642 (MMP2-003) 55481557-55505759 protein_coding
ENST00000543485 (MMP2-002) 55480533-55505525 protein_coding
ENST00000564864 (MMP2-004) 55479998-55485776 protein_coding
ENST00000566564 (MMP2-005) 55505375-55506239 nonsense_mediated_decay
ENST00000568715 (MMP2-007) 55478830-55485352 protein_coding
ENST00000570283 (MMP2-006) 55488662-55502889 protein_coding
ENST00000570308 (MMP2-008) 55389700-55506237 protein_coding
ENSG00000159387 (IRX6)
iroquois homeobox 6 		ENST00000290552 (IRX6-001) 55323760-55330760 protein_coding
ENST00000558315 (IRX6-002) 55325800-55327796 processed_transcript
ENSG00000259283 (RP11-26L20.3)
 ENST00000558730 (RP11-26L20.3-001) 55259969-55333588 antisense
ENSG00000260135 (RP11-212I21.2)
 ENST00000565307 (RP11-212I21.2-002) 55429135-55444759 lincRNA
ENST00000569037 (RP11-212I21.2-001) 55427558-55462297 lincRNA
ENST00000620495 (RP11-212I21.2-003) 55426797-55427951 lincRNA
ENSG00000263207 (RP11-26L20.4)
 ENST00000573934 (RP11-26L20.4-001) 55332355-55332967 lincRNA
ENSG00000274508 (RP11-212I21.5)
 ENST00000611626 (RP11-212I21.5-001) 55425574-55426130 lincRNA
CIL_0001GQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031738-ENSMUSG00000031740 CGP 10090 8:92674288-92853417
GeneTranscriptPositionBiotype
ENSMUSG00000031738 (Irx6)
Iroquois related homeobox 6 (Drosophila) 		ENSMUST00000034185 (Irx6-001) 92674288-92680956 protein_coding
ENSMUST00000167261 (Irx6-002) 92674826-92680956 protein_coding
ENSMUSG00000031740 (Mmp2)
matrix metallopeptidase 2 		ENSMUST00000034187 (Mmp2-201) 92827328-92853417 protein_coding
ENSMUSG00000078967 (Gm3272)
predicted pseudogene 3272 		ENSMUST00000181181 (Gm3272-001) 92715747-92716975 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GQ_0001ENSG00000087245ENST00000219070ENST00000437642ENST00000543485ENST00000564864ENST00000566564ENST00000568715ENST00000570283ENST00000570308ENSG00000159387ENST00000290552ENST00000558315ENSG00000259283ENST00000558730ENSG00000260135ENST00000565307ENST00000569037ENST00000620495ENSG00000263207ENST00000573934ENSG00000274508ENST00000611626CIL_0001GQ_0002ENSMUSG00000031738ENSMUST00000034185ENSMUST00000167261ENSMUSG00000031740ENSMUST00000034187ENSMUSG00000078967ENSMUST00000181181
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GQ_0001ENSG00000087245ENST00000219070ENST00000437642ENST00000543485ENST00000564864ENST00000566564ENST00000570283ENST00000570308ENSG00000159387ENST00000290552ENST00000558315ENSG00000259283ENST00000558730ENSG00000260135ENST00000565307ENST00000569037ENST00000620495ENSG00000263207ENST00000573934ENSG00000274508ENST00000611626CIL_0001GQ_0002ENSMUSG00000031738ENSMUST00000034185ENSMUST00000167261ENSMUSG00000031740ENSMUST00000034187ENSMUSG00000078967ENSMUST00000181181
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087245 ENST00000219070 160.351±0.00 4.443±0.00 1.036±0.00 0.197±0.09 20.144±7.78 17.419±12.95 5.071±2.95 1.955±1.59 6.240±5.31 15.342±10.23 3.816±2.06 27.732±21.21 36.056±15.06 13.388±8.95
ENST00000437642 N/A N/A 0.848±0.00 0.150±0.00 N/A N/A 1.994±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000543485 194.921±0.00 9.945±0.00 0.930±0.00 0.927±0.00 27.068±6.17 7.315±0.00 2.005±0.00 4.355±3.42 9.909±0.00 5.236±0.00 1.374±0.00 23.294±11.82 89.904±0.00 N/A
ENST00000564864 N/A N/A 3.199±0.00 N/A 25.877±0.00 N/A N/A 1.581±0.00 20.523±0.00 12.810±0.00 N/A 12.732±0.00 N/A N/A
ENST00000566564 N/A N/A N/A 1.338±0.00 N/A N/A N/A N/A 4.069±0.00 N/A N/A N/A N/A N/A
ENST00000568715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570283 N/A N/A N/A N/A N/A N/A N/A N/A 18.349±0.00 N/A N/A 38.998±0.00 114.880±0.00 23.417±0.00
ENST00000570308 N/A N/A N/A N/A 11.842±0.00 N/A N/A N/A N/A N/A 2.076±0.00 N/A N/A N/A
ENSG00000159387 ENST00000290552 4.461±0.00 0.081±0.00 0.183±0.00 0.013±0.00 8.555±8.29 0.413±0.38 1.912±1.87 0.966±0.00 0.025±0.00 0.269±0.26 1.161±0.00 0.080±0.05 0.070±0.02 0.052±0.00
ENST00000558315 N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A
ENSG00000259283 ENST00000558730 N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000260135 ENST00000565307 N/A N/A N/A N/A 0.214±0.00 N/A 0.053±0.00 N/A N/A N/A N/A 0.063±0.00 0.097±0.00 N/A
ENST00000569037 N/A N/A N/A N/A 0.058±0.00 N/A 0.026±0.00 N/A N/A 0.230±0.00 N/A 0.087±0.00 N/A N/A
ENST00000620495 0.138±0.00 0.058±0.00 N/A 0.065±0.00 0.278±0.00 0.055±0.00 0.025±0.00 0.029±0.00 N/A 0.206±0.00 N/A 0.083±0.00 0.077±0.00 N/A
ENSG00000263207 ENST00000573934 N/A N/A N/A N/A 0.112±0.00 0.232±0.00 0.033±0.00 0.035±0.00 N/A N/A N/A N/A N/A 0.065±0.00
ENSG00000274508 ENST00000611626 N/A 0.267±0.00 N/A N/A N/A N/A 0.098±0.07 N/A N/A N/A N/A N/A 0.114±0.01 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031738 ENSMUST00000034185 N/A N/A N/A 0.575±0.36 0.031±0.02 0.041±0.01 N/A N/A N/A N/A N/A N/A 0.010±0.00 0.046±0.00
ENSMUST00000167261 N/A N/A N/A 0.194±0.04 N/A 0.058±0.03 0.013±0.00 N/A 0.014±0.01 0.017±0.01 N/A N/A 0.002±0.00 0.067±0.01
ENSMUSG00000031740 ENSMUST00000034187 135.853±68.65 11.109±0.75 143.946±12.57 6.292±3.64 189.682±46.05 59.395±7.64 31.927±2.44 8.291±0.98 3.404±1.71 57.402±6.83 9.793±1.72 86.906±23.63 8.473±5.18 1.898±0.71
ENSMUSG00000078967 ENSMUST00000181181 0.326±0.04 0.694±0.15 0.213±0.05 1.534±1.43 0.369±0.17 0.265±0.14 0.430±0.13 0.735±0.15 0.428±0.36 0.432±0.06 0.998±0.23 0.430±0.23 0.273±0.18 0.426±0.03

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