C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 4-aminobutyrate aminotransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569156 ABAT-006 ENSG00000183044 9606 + 16:8720719-8781522 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000569156
Transcript ID Muscle
ENST00000569156 0.356±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RJ CIL_0008RJ_0001 VISTA 16:8081301-8682556
CIL_0007RL CIL_0007RL_0001 VISTA 16:8108831-8709719
CIL_0000ER CIL_0000ER_0001 CGP 16:8621683-8784575
CIL_0000EU CIL_0000EU_0001 CGP 16:8674565-8797648

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003867 IEA 4-aminobutyrate transaminase activity
GO:0008483 IEA transaminase activity
GO:0009448 IEA gamma-aminobutyric acid metabolic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065987 Abat-001 protein_coding Mus_musculus 0 1570
ENSMUST00000115839 Abat-005 protein_coding Mus_musculus 0 1033
ENSMUST00000138987 Abat-007 protein_coding Mus_musculus 0 523
ENSMUST00000128459 Abat-006 processed_transcript Mus_musculus 0 315

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